A Machine Learning Approach to DNA Shotgun Sequence Assembly. 2015.
DNA FRAGMENT ASSEMBLY USING NEURAL PREDICTION TECHNIQUES. 1999.
The main idea is to use NN for read prediction.
For the reads with same prediction pattern, we cluster them into several parts and use the existing assemblers to assemble each part.
Below are a lot of public datasets https://www.openml.org/search?type=data http://archive.ics.uci.edu/ml/datasets.php https://www.re3data.org/ https://www.data.gov/ https://www.kdnuggets.com/datasets/index.html http://dataportals.org/ Related
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