GAML: genome assembly by maximum likelihood (2015)

Bayesian Genome Assembly and Assessment by Markov Chain Monte Carlo Sampling (2014)

ILP-based maximum likelihood genome scaffolding (2014)

Toward a statistically explicit understanding of de novo sequence assembly (2013)

CGAL: computing genome assembly likelihoods (2013)

Denovo likelihood-based measures for comparing genome assemblies (2013)

ALE: a generic assembly likelihood evaluation framework for assessing the accuracy of genome and metagenome assemblies (2013)

Maximum Likelihood Genome Assembly (2009)

Categories: NA

Leave a Reply

Your email address will not be published. Required fields are marked *

Related Posts

NA

Public Dataset List

Below are a lot of public datasets https://www.openml.org/search?type=data http://archive.ics.uci.edu/ml/datasets.php https://www.re3data.org/ https://www.data.gov/ https://www.kdnuggets.com/datasets/index.html http://dataportals.org/   Related

NA

Using NN to perform Genome Assembly

A Machine Learning Approach to DNA Shotgun Sequence Assembly. 2015. DNA FRAGMENT ASSEMBLY USING NEURAL PREDICTION TECHNIQUES. 1999. The main idea is to use NN for read prediction. For the reads with same prediction pattern, we cluster them Read more…

NA

ASA Statement on the Role of Statistics in Data Science

ASA Statement on the Role of Statistics in Data Science The rise of data science, including Big Data and data analytics, has recently attracted enormous attention in the popular press for its spectacular contributions in Read more…

%d bloggers like this: